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I just updated to v2.6 running on Snow Leapord and I'm having some issues with the outlining.
Sometimes when I collapse a region, the mouse cursor is unable to select the line it is currently hovering over, instead selecting a line above its current location when I click. Also, having inserted a line of code, I have noticed that the automatic outlining of methods and properties occurs in the wrong place, offering me the option to collapse a region that is already a couple of lines into the method, but not the method itself.
Confirming the same behaviour on 188.8.131.52 compiled from source on Ubuntu 11.04; using Mono 2.10.5 (also compiled from source).
This usually happens after I "Toggle all folds" (shift+ctrl+a).
In addition to what Chris Hardy described, when I select lines over a closed region, the region opens up, which doesn't happen before the erratic behaviour starts (that is, selecting a closed region doesn't open it).
The syptoms go away after restarting Monodevelop.
Fixed in 2.8. The collapsing algorithm got replaced.