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I run mdtool from the command line regularly.
With the latest MonoDevelop & MonoTouch I am now seeing the following error message every time I run it:
(mdtool:23251): Gtk-CRITICAL **: gtk_main_quit: assertion `main_loops != NULL' failed
The tool exits with an OK return code, but this is unnecessary noise.
This was fixed in master a while back, but I've now backported it to the 3.0.x branch since it seems to be causing some confusion.